Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Crnkl1P63154 Gm12485-201ENSMUST00000119641 291 ntBASIC12.31□□□□□ -0.44
Crnkl1P63154 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.31□□□□□ -0.44
Crnkl1P63154 Gm19078-201ENSMUST00000206311 727 ntBASIC12.31□□□□□ -0.44
Crnkl1P63154 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.31□□□□□ -0.44
Crnkl1P63154 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Crnkl1P63154 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Crnkl1P63154 Gm26035-201ENSMUST00000083065 308 ntBASIC12.31□□□□□ -0.44
Crnkl1P63154 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Crnkl1P63154 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.31□□□□□ -0.44
Crnkl1P63154 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Crnkl1P63154 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Crnkl1P63154 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Crnkl1P63154 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Crnkl1P63154 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Crnkl1P63154 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Crnkl1P63154 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.3□□□□□ -0.44
Crnkl1P63154 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.3□□□□□ -0.44
Crnkl1P63154 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.3□□□□□ -0.44
Crnkl1P63154 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Gm9794-201ENSMUST00000202370 423 ntBASIC12.3□□□□□ -0.44
Crnkl1P63154 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Gm6180-201ENSMUST00000065243 498 ntBASIC12.3□□□□□ -0.44
Crnkl1P63154 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Crnkl1P63154 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Crnkl1P63154 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.3□□□□□ -0.44
Crnkl1P63154 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Crnkl1P63154 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crnkl1P63154 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.29□□□□□ -0.44
Crnkl1P63154 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.29□□□□□ -0.44
Crnkl1P63154 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Crnkl1P63154 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.29□□□□□ -0.44
Crnkl1P63154 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.29□□□□□ -0.44
Crnkl1P63154 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Crnkl1P63154 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Crnkl1P63154 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms