Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Lim2P56563 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lim2P56563 Gm27023-201ENSMUST00000182372 285 ntBASIC12.42□□□□□ -0.42
Lim2P56563 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.42□□□□□ -0.42
Lim2P56563 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.42□□□□□ -0.42
Lim2P56563 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.42□□□□□ -0.42
Lim2P56563 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.42□□□□□ -0.42
Lim2P56563 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Lim2P56563 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Lim2P56563 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Lim2P56563 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lim2P56563 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Lim2P56563 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.42□□□□□ -0.42
Lim2P56563 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.41□□□□□ -0.42
Lim2P56563 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.41□□□□□ -0.42
Lim2P56563 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Gm25214-201ENSMUST00000104573 129 ntBASIC12.41□□□□□ -0.42
Lim2P56563 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.41□□□□□ -0.42
Lim2P56563 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lim2P56563 Gm13350-201ENSMUST00000120519 479 ntBASIC12.41□□□□□ -0.42
Lim2P56563 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.41□□□□□ -0.42
Lim2P56563 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.41□□□□□ -0.42
Lim2P56563 Gm25043-201ENSMUST00000158604 212 ntBASIC12.41□□□□□ -0.42
Lim2P56563 Gm7584-201ENSMUST00000175829 940 ntBASIC12.41□□□□□ -0.42
Lim2P56563 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lim2P56563 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Lim2P56563 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lim2P56563 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.4□□□□□ -0.42
Lim2P56563 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.4□□□□□ -0.42
Lim2P56563 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lim2P56563 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Lim2P56563 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.4□□□□□ -0.42
Lim2P56563 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.4□□□□□ -0.42
Lim2P56563 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.4□□□□□ -0.42
Lim2P56563 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.4□□□□□ -0.42
Lim2P56563 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.4□□□□□ -0.42
Lim2P56563 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lim2P56563 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms