Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.76□□□□□ -0.05
Ercc3P49135 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.76□□□□□ -0.05
Ercc3P49135 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ercc3P49135 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 Gm23270-201ENSMUST00000104055 131 ntBASIC14.76□□□□□ -0.05
Ercc3P49135 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.76□□□□□ -0.05
Ercc3P49135 Gm14760-201ENSMUST00000121831 999 ntBASIC14.76□□□□□ -0.05
Ercc3P49135 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ercc3P49135 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.76□□□□□ -0.05
Ercc3P49135 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.76□□□□□ -0.05
Ercc3P49135 Gm37201-201ENSMUST00000191845 523 ntBASIC14.76□□□□□ -0.05
Ercc3P49135 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ercc3P49135 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ercc3P49135 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ercc3P49135 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.75□□□□□ -0.05
Ercc3P49135 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Ercc3P49135 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.75□□□□□ -0.05
Ercc3P49135 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Gm12058-201ENSMUST00000118614 437 ntBASIC14.75□□□□□ -0.05
Ercc3P49135 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
Ercc3P49135 Gm17376-201ENSMUST00000166016 84 ntBASIC14.75□□□□□ -0.05
Ercc3P49135 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.75□□□□□ -0.05
Ercc3P49135 Gm27243-201ENSMUST00000183964 521 ntBASIC14.75□□□□□ -0.05
Ercc3P49135 Gm42937-201ENSMUST00000197360 752 ntBASIC14.75□□□□□ -0.05
Ercc3P49135 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.75□□□□□ -0.05
Ercc3P49135 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.75□□□□□ -0.05
Ercc3P49135 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ercc3P49135 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.75□□□□□ -0.05
Ercc3P49135 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.75□□□□□ -0.05
Ercc3P49135 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.75□□□□□ -0.05
Ercc3P49135 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ercc3P49135 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ercc3P49135 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Ercc3P49135 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.74□□□□□ -0.05
Ercc3P49135 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.74□□□□□ -0.05
Ercc3P49135 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ercc3P49135 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ercc3P49135 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Ercc3P49135 Gm24255-201ENSMUST00000104481 128 ntBASIC14.74□□□□□ -0.05
Ercc3P49135 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.74□□□□□ -0.05
Ercc3P49135 Gm24845-201ENSMUST00000158034 109 ntBASIC14.74□□□□□ -0.05
Ercc3P49135 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Ercc3P49135 Gm37259-201ENSMUST00000193903 849 ntBASIC14.74□□□□□ -0.05
Ercc3P49135 Gm44364-201ENSMUST00000198368 141 ntBASIC14.74□□□□□ -0.05
Ercc3P49135 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.74□□□□□ -0.05
Ercc3P49135 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Ercc3P49135 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.74□□□□□ -0.05
Ercc3P49135 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.74□□□□□ -0.05
Ercc3P49135 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ercc3P49135 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms