Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Vps4bP46467 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.61□□□□□ -0.39
Vps4bP46467 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vps4bP46467 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.61□□□□□ -0.39
Vps4bP46467 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.61□□□□□ -0.39
Vps4bP46467 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.61□□□□□ -0.39
Vps4bP46467 Gm7029-201ENSMUST00000173226 450 ntBASIC12.61□□□□□ -0.39
Vps4bP46467 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vps4bP46467 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.61□□□□□ -0.39
Vps4bP46467 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Vps4bP46467 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vps4bP46467 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.61□□□□□ -0.39
Vps4bP46467 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps4bP46467 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Vps4bP46467 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps4bP46467 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Vps4bP46467 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.6□□□□□ -0.39
Vps4bP46467 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.6□□□□□ -0.39
Vps4bP46467 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.6□□□□□ -0.39
Vps4bP46467 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps4bP46467 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps4bP46467 Gm27731-201ENSMUST00000185192 107 ntBASIC12.6□□□□□ -0.39
Vps4bP46467 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.6□□□□□ -0.39
Vps4bP46467 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.6□□□□□ -0.39
Vps4bP46467 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.6□□□□□ -0.39
Vps4bP46467 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.6□□□□□ -0.39
Vps4bP46467 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Vps4bP46467 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Gm10268-201ENSMUST00000085340 555 ntBASIC12.6□□□□□ -0.39
Vps4bP46467 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vps4bP46467 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vps4bP46467 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.6□□□□□ -0.39
Vps4bP46467 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps4bP46467 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.6□□□□□ -0.39
Vps4bP46467 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps4bP46467 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.6□□□□□ -0.39
Vps4bP46467 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps4bP46467 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.59□□□□□ -0.39
Vps4bP46467 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Vps4bP46467 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vps4bP46467 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.59□□□□□ -0.39
Vps4bP46467 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps4bP46467 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps4bP46467 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.59□□□□□ -0.39
Vps4bP46467 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vps4bP46467 Gm24136-201ENSMUST00000083374 165 ntBASIC12.59□□□□□ -0.39
Vps4bP46467 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps4bP46467 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 440.6 ms