Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.98□□□□□ -0.81
Cd27P41272 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Gm43758-201ENSMUST00000199500 367 ntBASIC9.98□□□□□ -0.81
Cd27P41272 Gm30285-201ENSMUST00000214614 422 ntBASIC9.98□□□□□ -0.81
Cd27P41272 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.98□□□□□ -0.81
Cd27P41272 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Cd27P41272 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.98□□□□□ -0.81
Cd27P41272 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.98□□□□□ -0.81
Cd27P41272 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Cd27P41272 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.98□□□□□ -0.81
Cd27P41272 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd27P41272 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Cd27P41272 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Cd27P41272 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cd27P41272 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.97□□□□□ -0.81
Cd27P41272 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Gm8712-201ENSMUST00000221090 701 ntBASIC9.97□□□□□ -0.81
Cd27P41272 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.97□□□□□ -0.81
Cd27P41272 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cd27P41272 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.97□□□□□ -0.81
Cd27P41272 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC9.97□□□□□ -0.81
Cd27P41272 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.97□□□□□ -0.81
Cd27P41272 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
Cd27P41272 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.97□□□□□ -0.81
Cd27P41272 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd27P41272 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cd27P41272 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cd27P41272 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Cd27P41272 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cd27P41272 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cd27P41272 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cd27P41272 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cd27P41272 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cd27P41272 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cd27P41272 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cd27P41272 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.96□□□□□ -0.81
Cd27P41272 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cd27P41272 Gm23270-201ENSMUST00000104055 131 ntBASIC9.96□□□□□ -0.82
Cd27P41272 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cd27P41272 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cd27P41272 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cd27P41272 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.96□□□□□ -0.82
Cd27P41272 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cd27P41272 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Cd27P41272 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.96□□□□□ -0.82
Cd27P41272 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cd27P41272 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC9.96□□□□□ -0.82
Cd27P41272 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cd27P41272 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.96□□□□□ -0.82
Cd27P41272 Gm27023-201ENSMUST00000182372 285 ntBASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms