Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Slc6a1P31648 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Slc6a1P31648 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Slc6a1P31648 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.7□□□□□ -0.7
Slc6a1P31648 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Slc6a1P31648 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Slc6a1P31648 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Gm11918-201ENSMUST00000121660 179 ntBASIC10.7□□□□□ -0.7
Slc6a1P31648 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.7□□□□□ -0.7
Slc6a1P31648 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.7□□□□□ -0.7
Slc6a1P31648 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.7□□□□□ -0.7
Slc6a1P31648 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.7□□□□□ -0.7
Slc6a1P31648 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.7□□□□□ -0.7
Slc6a1P31648 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.7□□□□□ -0.7
Slc6a1P31648 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.7□□□□□ -0.7
Slc6a1P31648 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.7□□□□□ -0.7
Slc6a1P31648 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Slc6a1P31648 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Slc6a1P31648 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Slc6a1P31648 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.7□□□□□ -0.7
Slc6a1P31648 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.7□□□□□ -0.7
Slc6a1P31648 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Slc6a1P31648 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.69□□□□□ -0.7
Slc6a1P31648 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Slc6a1P31648 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Slc6a1P31648 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Gm15806-201ENSMUST00000120696 955 ntBASIC10.69□□□□□ -0.7
Slc6a1P31648 Gm23984-201ENSMUST00000157139 203 ntBASIC10.69□□□□□ -0.7
Slc6a1P31648 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.69□□□□□ -0.7
Slc6a1P31648 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Slc6a1P31648 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.69□□□□□ -0.7
Slc6a1P31648 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Gm27701-201ENSMUST00000184498 110 ntBASIC10.69□□□□□ -0.7
Slc6a1P31648 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.69□□□□□ -0.7
Slc6a1P31648 Gm18187-201ENSMUST00000196476 984 ntBASIC10.69□□□□□ -0.7
Slc6a1P31648 Gm43433-201ENSMUST00000196573 481 ntBASIC10.69□□□□□ -0.7
Slc6a1P31648 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.69□□□□□ -0.7
Slc6a1P31648 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms