Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.43□□□□□ -0.58
Nedd8P29595 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.43□□□□□ -0.58
Nedd8P29595 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.43□□□□□ -0.58
Nedd8P29595 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Gm27533-201ENSMUST00000183800 152 ntBASIC11.43□□□□□ -0.58
Nedd8P29595 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Nedd8P29595 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.43□□□□□ -0.58
Nedd8P29595 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.43□□□□□ -0.58
Nedd8P29595 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.43□□□□□ -0.58
Nedd8P29595 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.43□□□□□ -0.58
Nedd8P29595 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nedd8P29595 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nedd8P29595 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.43□□□□□ -0.58
Nedd8P29595 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.42□□□□□ -0.58
Nedd8P29595 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nedd8P29595 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.42□□□□□ -0.58
Nedd8P29595 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nedd8P29595 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Nedd8P29595 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.42□□□□□ -0.58
Nedd8P29595 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.42□□□□□ -0.58
Nedd8P29595 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.42□□□□□ -0.58
Nedd8P29595 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.42□□□□□ -0.58
Nedd8P29595 Gm14760-201ENSMUST00000121831 999 ntBASIC11.42□□□□□ -0.58
Nedd8P29595 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.42□□□□□ -0.58
Nedd8P29595 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Gm27494-201ENSMUST00000184735 189 ntBASIC11.42□□□□□ -0.58
Nedd8P29595 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.42□□□□□ -0.58
Nedd8P29595 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Nedd8P29595 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.42□□□□□ -0.58
Nedd8P29595 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nedd8P29595 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nedd8P29595 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nedd8P29595 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.41□□□□□ -0.58
Nedd8P29595 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 BC043934-202ENSMUST00000185694 2356 ntBASIC11.41□□□□□ -0.58
Nedd8P29595 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nedd8P29595 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nedd8P29595 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms