Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ccl6P27784 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.68□□□□□ -0.86
Ccl6P27784 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.68□□□□□ -0.86
Ccl6P27784 Gm11591-201ENSMUST00000120063 702 ntBASIC9.68□□□□□ -0.86
Ccl6P27784 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Gm7809-201ENSMUST00000153199 742 ntBASIC9.68□□□□□ -0.86
Ccl6P27784 Gm16296-201ENSMUST00000159905 325 ntBASIC9.68□□□□□ -0.86
Ccl6P27784 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.68□□□□□ -0.86
Ccl6P27784 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.68□□□□□ -0.86
Ccl6P27784 Gm8738-201ENSMUST00000172606 329 ntBASIC9.68□□□□□ -0.86
Ccl6P27784 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC9.68□□□□□ -0.86
Ccl6P27784 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC9.68□□□□□ -0.86
Ccl6P27784 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC9.68□□□□□ -0.86
Ccl6P27784 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.68□□□□□ -0.86
Ccl6P27784 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.68□□□□□ -0.86
Ccl6P27784 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Ccl6P27784 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.68□□□□□ -0.86
Ccl6P27784 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.68□□□□□ -0.86
Ccl6P27784 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ccl6P27784 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Ccl6P27784 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl6P27784 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ccl6P27784 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccl6P27784 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.67□□□□□ -0.86
Ccl6P27784 Adra1a-206ENSMUST00000225182 2337 ntBASIC9.67□□□□□ -0.86
Ccl6P27784 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.67□□□□□ -0.86
Ccl6P27784 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.67□□□□□ -0.86
Ccl6P27784 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Ccl6P27784 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.67□□□□□ -0.86
Ccl6P27784 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.67□□□□□ -0.86
Ccl6P27784 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC9.67□□□□□ -0.86
Ccl6P27784 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Ccl6P27784 Gm25261-201ENSMUST00000157416 134 ntBASIC9.67□□□□□ -0.86
Ccl6P27784 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Ccl6P27784 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Ccl6P27784 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Ccl6P27784 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Ccl6P27784 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.67□□□□□ -0.86
Ccl6P27784 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccl6P27784 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl6P27784 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.67□□□□□ -0.86
Ccl6P27784 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccl6P27784 CT573086.2-201ENSMUST00000227277 4992 ntBASIC9.66□□□□□ -0.86
Ccl6P27784 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ccl6P27784 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ccl6P27784 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccl6P27784 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccl6P27784 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Ccl6P27784 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC9.66□□□□□ -0.86
Ccl6P27784 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccl6P27784 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ccl6P27784 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccl6P27784 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms