Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfrsf1bP25119 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfrsf1bP25119 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfrsf1bP25119 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfrsf1bP25119 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfrsf1bP25119 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Tnfrsf1bP25119 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfrsf1bP25119 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.56
Tnfrsf1bP25119 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.52□□□□□ -0.56
Tnfrsf1bP25119 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gm13570-201ENSMUST00000140763 309 ntBASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gm18304-201ENSMUST00000189162 546 ntBASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gm38341-201ENSMUST00000195357 515 ntBASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf1bP25119 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Gm43758-201ENSMUST00000199500 367 ntBASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1bP25119 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms