Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rb1P13405 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rb1P13405 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rb1P13405 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rb1P13405 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rb1P13405 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rb1P13405 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rb1P13405 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.8□□□□□ -0.36
Rb1P13405 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.8□□□□□ -0.36
Rb1P13405 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.8□□□□□ -0.36
Rb1P13405 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rb1P13405 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rb1P13405 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rb1P13405 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rb1P13405 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rb1P13405 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rb1P13405 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rb1P13405 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rb1P13405 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rb1P13405 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rb1P13405 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rb1P13405 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Rb1P13405 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rb1P13405 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.79□□□□□ -0.36
Rb1P13405 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.79□□□□□ -0.36
Rb1P13405 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.79□□□□□ -0.36
Rb1P13405 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rb1P13405 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rb1P13405 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.79□□□□□ -0.36
Rb1P13405 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.79□□□□□ -0.36
Rb1P13405 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.79□□□□□ -0.36
Rb1P13405 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.79□□□□□ -0.36
Rb1P13405 Gm16505-201ENSMUST00000179981 232 ntBASIC12.79□□□□□ -0.36
Rb1P13405 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.79□□□□□ -0.36
Rb1P13405 Gm13097-201ENSMUST00000210722 397 ntBASIC12.79□□□□□ -0.36
Rb1P13405 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Gm18212-201ENSMUST00000211678 889 ntBASIC12.79□□□□□ -0.36
Rb1P13405 Gm30285-201ENSMUST00000214614 422 ntBASIC12.79□□□□□ -0.36
Rb1P13405 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.79□□□□□ -0.36
Rb1P13405 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.79□□□□□ -0.36
Rb1P13405 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rb1P13405 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Rb1P13405 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Rb1P13405 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Rb1P13405 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rb1P13405 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rb1P13405 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rb1P13405 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rb1P13405 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.78□□□□□ -0.36
Rb1P13405 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.78□□□□□ -0.36
Rb1P13405 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.78□□□□□ -0.36
Rb1P13405 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rb1P13405 Gm17208-201ENSMUST00000168388 535 ntBASIC12.78□□□□□ -0.36
Rb1P13405 Gm8738-201ENSMUST00000172606 329 ntBASIC12.78□□□□□ -0.36
Rb1P13405 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms