Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.97□□□□□ -0.49
Msx1P13297 Gm21139-201ENSMUST00000186594 877 ntBASIC11.97□□□□□ -0.49
Msx1P13297 Gm31256-201ENSMUST00000194705 506 ntBASIC11.97□□□□□ -0.49
Msx1P13297 AC132104.1-201ENSMUST00000213615 260 ntBASIC11.97□□□□□ -0.49
Msx1P13297 AC139323.1-201ENSMUST00000223370 1040 ntBASIC11.97□□□□□ -0.49
Msx1P13297 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx1P13297 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx1P13297 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx1P13297 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx1P13297 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx1P13297 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.97□□□□□ -0.49
Msx1P13297 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Msx1P13297 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx1P13297 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.97□□□□□ -0.49
Msx1P13297 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.97□□□□□ -0.49
Msx1P13297 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx1P13297 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx1P13297 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx1P13297 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.97□□□□□ -0.49
Msx1P13297 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Msx1P13297 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx1P13297 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Msx1P13297 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.96□□□□□ -0.49
Msx1P13297 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.96□□□□□ -0.49
Msx1P13297 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Msx1P13297 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.96□□□□□ -0.49
Msx1P13297 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Msx1P13297 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.96□□□□□ -0.49
Msx1P13297 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Msx1P13297 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.96□□□□□ -0.49
Msx1P13297 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.96□□□□□ -0.49
Msx1P13297 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Msx1P13297 Gm24514-201ENSMUST00000174961 285 ntBASIC11.96□□□□□ -0.49
Msx1P13297 Gm26956-201ENSMUST00000182176 986 ntBASIC11.96□□□□□ -0.49
Msx1P13297 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.96□□□□□ -0.49
Msx1P13297 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.96□□□□□ -0.49
Msx1P13297 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Gm43787-201ENSMUST00000197792 1037 ntBASIC11.96□□□□□ -0.49
Msx1P13297 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.96□□□□□ -0.49
Msx1P13297 Gm45525-201ENSMUST00000210800 389 ntBASIC11.96□□□□□ -0.49
Msx1P13297 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.96□□□□□ -0.49
Msx1P13297 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC11.96□□□□□ -0.49
Msx1P13297 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.96□□□□□ -0.49
Msx1P13297 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Msx1P13297 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Msx1P13297 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.96□□□□□ -0.5
Msx1P13297 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
Msx1P13297 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Msx1P13297 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx1P13297 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Msx1P13297 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Msx1P13297 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx1P13297 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx1P13297 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx1P13297 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx1P13297 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx1P13297 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx1P13297 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx1P13297 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx1P13297 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.95□□□□□ -0.5
Msx1P13297 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx1P13297 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx1P13297 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx1P13297 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Msx1P13297 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.95□□□□□ -0.5
Msx1P13297 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Msx1P13297 Gm12566-201ENSMUST00000121479 359 ntBASIC11.95□□□□□ -0.5
Msx1P13297 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.95□□□□□ -0.5
Msx1P13297 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx1P13297 Gm22334-201ENSMUST00000158070 133 ntBASIC11.95□□□□□ -0.5
Msx1P13297 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.95□□□□□ -0.5
Msx1P13297 Gm37631-201ENSMUST00000192275 364 ntBASIC11.95□□□□□ -0.5
Msx1P13297 Gm37042-201ENSMUST00000193816 581 ntBASIC11.95□□□□□ -0.5
Msx1P13297 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx1P13297 Gm13097-201ENSMUST00000210722 397 ntBASIC11.95□□□□□ -0.5
Msx1P13297 AC132384.10-201ENSMUST00000217862 1204 ntBASIC11.95□□□□□ -0.5
Msx1P13297 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.95□□□□□ -0.5
Msx1P13297 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.95□□□□□ -0.5
Msx1P13297 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx1P13297 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx1P13297 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.95□□□□□ -0.5
Msx1P13297 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms