Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.94□□□□□ -0.66
Ccl3P10855 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ccl3P10855 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.94□□□□□ -0.66
Ccl3P10855 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Ccl3P10855 Gm14460-201ENSMUST00000121511 639 ntBASIC10.94□□□□□ -0.66
Ccl3P10855 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccl3P10855 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ccl3P10855 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccl3P10855 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC10.94□□□□□ -0.66
Ccl3P10855 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Gm8343-201ENSMUST00000182705 994 ntBASIC10.94□□□□□ -0.66
Ccl3P10855 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Mir7686-201ENSMUST00000200604 57 ntBASIC10.94□□□□□ -0.66
Ccl3P10855 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.94□□□□□ -0.66
Ccl3P10855 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.94□□□□□ -0.66
Ccl3P10855 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccl3P10855 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Ccl3P10855 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccl3P10855 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl3P10855 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ccl3P10855 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ccl3P10855 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.93□□□□□ -0.66
Ccl3P10855 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Gm11509-201ENSMUST00000117358 325 ntBASIC10.93□□□□□ -0.66
Ccl3P10855 Gm12857-201ENSMUST00000117678 592 ntBASIC10.93□□□□□ -0.66
Ccl3P10855 Gm14724-201ENSMUST00000118400 537 ntBASIC10.93□□□□□ -0.66
Ccl3P10855 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.93□□□□□ -0.66
Ccl3P10855 Gm8199-201ENSMUST00000121323 823 ntBASIC10.93□□□□□ -0.66
Ccl3P10855 Gm14760-201ENSMUST00000121831 999 ntBASIC10.93□□□□□ -0.66
Ccl3P10855 Gm15881-201ENSMUST00000148792 942 ntBASIC10.93□□□□□ -0.66
Ccl3P10855 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Rprl1-201ENSMUST00000158050 327 ntBASIC10.93□□□□□ -0.66
Ccl3P10855 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.93□□□□□ -0.66
Ccl3P10855 Gm10774-201ENSMUST00000188689 204 ntBASIC10.93□□□□□ -0.66
Ccl3P10855 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.93□□□□□ -0.66
Ccl3P10855 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.93□□□□□ -0.66
Ccl3P10855 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.93□□□□□ -0.66
Ccl3P10855 Gm2965-201ENSMUST00000198365 343 ntBASIC10.93□□□□□ -0.66
Ccl3P10855 Gm4607-201ENSMUST00000206649 577 ntBASIC10.93□□□□□ -0.66
Ccl3P10855 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
Ccl3P10855 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ccl3P10855 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ccl3P10855 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ccl3P10855 Gm10288-201ENSMUST00000084614 537 ntBASIC10.93□□□□□ -0.66
Ccl3P10855 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.93□□□□□ -0.66
Ccl3P10855 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ccl3P10855 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl3P10855 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ccl3P10855 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl3P10855 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms