Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cops4O88544 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.46□□□□□ -0.57
Cops4O88544 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Cops4O88544 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.46□□□□□ -0.57
Cops4O88544 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.46□□□□□ -0.57
Cops4O88544 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.46□□□□□ -0.57
Cops4O88544 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Cops4O88544 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.46□□□□□ -0.57
Cops4O88544 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Cops4O88544 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.46□□□□□ -0.57
Cops4O88544 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Gm7488-201ENSMUST00000117148 684 ntBASIC11.46□□□□□ -0.57
Cops4O88544 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.46□□□□□ -0.57
Cops4O88544 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.46□□□□□ -0.57
Cops4O88544 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.46□□□□□ -0.57
Cops4O88544 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.46□□□□□ -0.57
Cops4O88544 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cops4O88544 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cops4O88544 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cops4O88544 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cops4O88544 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cops4O88544 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cops4O88544 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cops4O88544 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.46□□□□□ -0.58
Cops4O88544 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cops4O88544 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cops4O88544 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cops4O88544 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cops4O88544 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cops4O88544 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.46□□□□□ -0.58
Cops4O88544 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cops4O88544 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cops4O88544 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Cops4O88544 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cops4O88544 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cops4O88544 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cops4O88544 Gm16202-201ENSMUST00000117532 544 ntBASIC11.45□□□□□ -0.58
Cops4O88544 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Cops4O88544 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Gm5866-201ENSMUST00000177881 973 ntBASIC11.45□□□□□ -0.58
Cops4O88544 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.45□□□□□ -0.58
Cops4O88544 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.45□□□□□ -0.58
Cops4O88544 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Gm15823-201ENSMUST00000064305 670 ntBASIC11.45□□□□□ -0.58
Cops4O88544 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cops4O88544 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cops4O88544 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cops4O88544 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cops4O88544 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.45□□□□□ -0.58
Cops4O88544 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cops4O88544 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cops4O88544 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cops4O88544 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms