Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Rubie-203ENSMUST00000227803 2430 ntBASIC12.37□□□□□ -0.43
Gm3139J3QK78 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Gm15236-201ENSMUST00000117309 379 ntBASIC12.37□□□□□ -0.43
Gm3139J3QK78 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.37□□□□□ -0.43
Gm3139J3QK78 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.37□□□□□ -0.43
Gm3139J3QK78 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.37□□□□□ -0.43
Gm3139J3QK78 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Gm9230-201ENSMUST00000188228 532 ntBASIC12.37□□□□□ -0.43
Gm3139J3QK78 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.37□□□□□ -0.43
Gm3139J3QK78 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.37□□□□□ -0.43
Gm3139J3QK78 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.37□□□□□ -0.43
Gm3139J3QK78 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.37□□□□□ -0.43
Gm3139J3QK78 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gm3139J3QK78 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.37□□□□□ -0.43
Gm3139J3QK78 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm3139J3QK78 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.36□□□□□ -0.43
Gm3139J3QK78 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Gm13296-201ENSMUST00000117854 997 ntBASIC12.36□□□□□ -0.43
Gm3139J3QK78 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.36□□□□□ -0.43
Gm3139J3QK78 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.36□□□□□ -0.43
Gm3139J3QK78 Gm32999-201ENSMUST00000192693 562 ntBASIC12.36□□□□□ -0.43
Gm3139J3QK78 Gm19187-201ENSMUST00000206781 892 ntBASIC12.36□□□□□ -0.43
Gm3139J3QK78 Gm18056-201ENSMUST00000207670 568 ntBASIC12.36□□□□□ -0.43
Gm3139J3QK78 Gm18061-201ENSMUST00000208350 562 ntBASIC12.36□□□□□ -0.43
Gm3139J3QK78 Gm18063-201ENSMUST00000208529 568 ntBASIC12.36□□□□□ -0.43
Gm3139J3QK78 Gm18052-201ENSMUST00000208750 559 ntBASIC12.36□□□□□ -0.43
Gm3139J3QK78 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm3139J3QK78 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.36□□□□□ -0.43
Gm3139J3QK78 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.36□□□□□ -0.43
Gm3139J3QK78 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3139J3QK78 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Gm3139J3QK78 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms