Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Srp54bE9PXC0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Srp54bE9PXC0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Srp54bE9PXC0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Srp54bE9PXC0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Srp54bE9PXC0 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Srp54bE9PXC0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Srp54bE9PXC0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Srp54bE9PXC0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Srp54bE9PXC0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Srp54bE9PXC0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Srp54bE9PXC0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Srp54bE9PXC0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Srp54bE9PXC0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Srp54bE9PXC0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Srp54bE9PXC0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Gm14644-201ENSMUST00000116671 647 ntBASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Gm18304-201ENSMUST00000189162 546 ntBASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Gm42937-201ENSMUST00000197360 752 ntBASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Gm19187-201ENSMUST00000206781 892 ntBASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.28□□□□□ -0.44
Srp54bE9PXC0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srp54bE9PXC0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Srp54bE9PXC0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Srp54bE9PXC0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Srp54bE9PXC0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Srp54bE9PXC0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Srp54bE9PXC0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
Srp54bE9PXC0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.27□□□□□ -0.45
Srp54bE9PXC0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Gm17812-201ENSMUST00000204935 318 ntBASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srp54bE9PXC0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms