Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.16□□□□□ -0.46
Chd3B1AR17 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chd3B1AR17 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.16□□□□□ -0.46
Chd3B1AR17 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chd3B1AR17 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.16□□□□□ -0.46
Chd3B1AR17 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chd3B1AR17 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chd3B1AR17 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chd3B1AR17 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.16□□□□□ -0.46
Chd3B1AR17 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chd3B1AR17 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chd3B1AR17 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.16□□□□□ -0.46
Chd3B1AR17 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Chd3B1AR17 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd3B1AR17 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.16□□□□□ -0.46
Chd3B1AR17 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Gm23699-201ENSMUST00000158835 135 ntBASIC12.15□□□□□ -0.46
Chd3B1AR17 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 Gm43138-201ENSMUST00000199123 708 ntBASIC12.15□□□□□ -0.46
Chd3B1AR17 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.15□□□□□ -0.46
Chd3B1AR17 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.15□□□□□ -0.46
Chd3B1AR17 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.15□□□□□ -0.46
Chd3B1AR17 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.15□□□□□ -0.46
Chd3B1AR17 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Gm29787-201ENSMUST00000222129 849 ntBASIC12.15□□□□□ -0.46
Chd3B1AR17 Gm270-201ENSMUST00000223010 976 ntBASIC12.15□□□□□ -0.46
Chd3B1AR17 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.15□□□□□ -0.46
Chd3B1AR17 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd3B1AR17 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.15□□□□□ -0.47
Chd3B1AR17 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.14□□□□□ -0.47
Chd3B1AR17 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chd3B1AR17 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chd3B1AR17 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.14□□□□□ -0.47
Chd3B1AR17 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chd3B1AR17 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd3B1AR17 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chd3B1AR17 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd3B1AR17 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd3B1AR17 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Chd3B1AR17 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd3B1AR17 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.14□□□□□ -0.47
Chd3B1AR17 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.14□□□□□ -0.47
Chd3B1AR17 Gm5616-201ENSMUST00000165252 384 ntBASIC12.14□□□□□ -0.47
Chd3B1AR17 Gm8741-201ENSMUST00000174736 384 ntBASIC12.14□□□□□ -0.47
Chd3B1AR17 Gm29615-201ENSMUST00000185371 697 ntBASIC12.14□□□□□ -0.47
Chd3B1AR17 Gm28224-201ENSMUST00000186078 697 ntBASIC12.14□□□□□ -0.47
Chd3B1AR17 Gm29001-201ENSMUST00000186177 697 ntBASIC12.14□□□□□ -0.47
Chd3B1AR17 Gm28292-201ENSMUST00000186593 697 ntBASIC12.14□□□□□ -0.47
Chd3B1AR17 Gm28101-201ENSMUST00000187608 697 ntBASIC12.14□□□□□ -0.47
Chd3B1AR17 Gm29076-201ENSMUST00000187689 697 ntBASIC12.14□□□□□ -0.47
Chd3B1AR17 Gm28302-201ENSMUST00000187931 697 ntBASIC12.14□□□□□ -0.47
Chd3B1AR17 Gm28646-201ENSMUST00000188220 697 ntBASIC12.14□□□□□ -0.47
Chd3B1AR17 Gm28205-201ENSMUST00000189177 697 ntBASIC12.14□□□□□ -0.47
Chd3B1AR17 Gm29032-201ENSMUST00000189797 697 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms