Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.22□□□□□ -0.61
H2afb3S4R1G7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.22□□□□□ -0.61
H2afb3S4R1G7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Gm19163-201ENSMUST00000223313 780 ntBASIC11.22□□□□□ -0.61
H2afb3S4R1G7 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Gm10012-201ENSMUST00000078252 192 ntBASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.22□□□□□ -0.61
H2afb3S4R1G7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Gm15806-201ENSMUST00000120696 955 ntBASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Gm24196-201ENSMUST00000179161 110 ntBASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
H2afb3S4R1G7 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb3S4R1G7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
H2afb3S4R1G7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms