Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Gm18730-201ENSMUST00000218038 343 ntBASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Gm14208-201ENSMUST00000119645 678 ntBASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Gm12266-201ENSMUST00000120311 962 ntBASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Gm24749-201ENSMUST00000157838 343 ntBASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Mir5132-201ENSMUST00000175166 71 ntBASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Gm9630-201ENSMUST00000178304 885 ntBASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.91□□□□□ -0.34
Smarcb1Q9Z0H3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Gm17040-202ENSMUST00000170597 889 ntBASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcb1Q9Z0H3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Smarcb1Q9Z0H3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.35
Smarcb1Q9Z0H3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Smarcb1Q9Z0H3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms