Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubd1Q9R1K7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubd1Q9R1K7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubd1Q9R1K7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubd1Q9R1K7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Tubd1Q9R1K7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Gm14723-201ENSMUST00000118686 215 ntBASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Gm37259-201ENSMUST00000193903 849 ntBASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Gm35960-201ENSMUST00000202712 767 ntBASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Gm10312-201ENSMUST00000078515 489 ntBASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubd1Q9R1K7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Gm14109-201ENSMUST00000118814 309 ntBASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Gm43179-201ENSMUST00000198797 275 ntBASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.59□□□□□ -0.39
Tubd1Q9R1K7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
Tubd1Q9R1K7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.58□□□□□ -0.39
Tubd1Q9R1K7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Tubd1Q9R1K7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms