Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.92□□□□□ -0.18
AmfrQ9R049 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.92□□□□□ -0.18
AmfrQ9R049 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.92□□□□□ -0.18
AmfrQ9R049 Mir8109-201ENSMUST00000184375 117 ntBASIC13.92□□□□□ -0.18
AmfrQ9R049 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
AmfrQ9R049 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.92□□□□□ -0.18
AmfrQ9R049 Gm5781-201ENSMUST00000219792 443 ntBASIC13.92□□□□□ -0.18
AmfrQ9R049 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.92□□□□□ -0.18
AmfrQ9R049 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
AmfrQ9R049 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
AmfrQ9R049 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
AmfrQ9R049 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
AmfrQ9R049 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.92□□□□□ -0.18
AmfrQ9R049 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AmfrQ9R049 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
AmfrQ9R049 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
AmfrQ9R049 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
AmfrQ9R049 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AmfrQ9R049 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AmfrQ9R049 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
AmfrQ9R049 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.91□□□□□ -0.18
AmfrQ9R049 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AmfrQ9R049 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AmfrQ9R049 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.91□□□□□ -0.18
AmfrQ9R049 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
AmfrQ9R049 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.91□□□□□ -0.18
AmfrQ9R049 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AmfrQ9R049 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.91□□□□□ -0.18
AmfrQ9R049 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AmfrQ9R049 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AmfrQ9R049 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.91□□□□□ -0.18
AmfrQ9R049 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.91□□□□□ -0.18
AmfrQ9R049 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.91□□□□□ -0.18
AmfrQ9R049 Gm38092-201ENSMUST00000195600 653 ntBASIC13.91□□□□□ -0.18
AmfrQ9R049 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.91□□□□□ -0.18
AmfrQ9R049 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.91□□□□□ -0.18
AmfrQ9R049 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AmfrQ9R049 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.91□□□□□ -0.18
AmfrQ9R049 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AmfrQ9R049 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
AmfrQ9R049 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.91□□□□□ -0.18
AmfrQ9R049 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
AmfrQ9R049 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
AmfrQ9R049 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AmfrQ9R049 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AmfrQ9R049 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AmfrQ9R049 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.9□□□□□ -0.18
AmfrQ9R049 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
AmfrQ9R049 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Mir1247-201ENSMUST00000116706 82 ntBASIC13.9□□□□□ -0.18
AmfrQ9R049 Gm14921-201ENSMUST00000118643 908 ntBASIC13.9□□□□□ -0.18
AmfrQ9R049 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.9□□□□□ -0.18
AmfrQ9R049 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.9□□□□□ -0.18
AmfrQ9R049 Gm9630-201ENSMUST00000178304 885 ntBASIC13.9□□□□□ -0.18
AmfrQ9R049 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.9□□□□□ -0.18
AmfrQ9R049 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.9□□□□□ -0.18
AmfrQ9R049 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.9□□□□□ -0.18
AmfrQ9R049 Gm8227-201ENSMUST00000223306 571 ntBASIC13.9□□□□□ -0.18
AmfrQ9R049 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
AmfrQ9R049 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.9□□□□□ -0.18
AmfrQ9R049 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms