Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Gm2260-201ENSMUST00000184965 657 ntBASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube3bQ9ES34 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.77□□□□□ -0.04
Ube3bQ9ES34 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube3bQ9ES34 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube3bQ9ES34 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube3bQ9ES34 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube3bQ9ES34 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube3bQ9ES34 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ube3bQ9ES34 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube3bQ9ES34 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube3bQ9ES34 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.77□□□□□ -0.04
Ube3bQ9ES34 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Ube3bQ9ES34 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ube3bQ9ES34 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube3bQ9ES34 Gm11989-201ENSMUST00000117240 672 ntBASIC14.77□□□□□ -0.05
Ube3bQ9ES34 Gm11362-201ENSMUST00000118838 850 ntBASIC14.77□□□□□ -0.05
Ube3bQ9ES34 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.77□□□□□ -0.05
Ube3bQ9ES34 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ube3bQ9ES34 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.77□□□□□ -0.05
Ube3bQ9ES34 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.77□□□□□ -0.05
Ube3bQ9ES34 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.77□□□□□ -0.05
Ube3bQ9ES34 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ube3bQ9ES34 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ube3bQ9ES34 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ube3bQ9ES34 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
Ube3bQ9ES34 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ube3bQ9ES34 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Ube3bQ9ES34 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ube3bQ9ES34 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
Ube3bQ9ES34 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.77□□□□□ -0.05
Ube3bQ9ES34 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ube3bQ9ES34 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Gm14208-201ENSMUST00000119645 678 ntBASIC14.76□□□□□ -0.05
Ube3bQ9ES34 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Gm24990-201ENSMUST00000157406 323 ntBASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Rprl1-201ENSMUST00000158050 327 ntBASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.76□□□□□ -0.05
Ube3bQ9ES34 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms