Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Gm27989-201ENSMUST00000184721 107 ntBASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.95□□□□□ -0.5
Ube4bQ9ES00 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.94□□□□□ -0.5
Ube4bQ9ES00 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Mir7684-201ENSMUST00000183858 60 ntBASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Mir8102-201ENSMUST00000184148 139 ntBASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ube4bQ9ES00 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.93□□□□□ -0.5
Ube4bQ9ES00 Gm27838-201ENSMUST00000184829 128 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms