Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Gm6082-201ENSMUST00000215204 454 ntBASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cdc40Q9DC48 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Cdc40Q9DC48 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Cdc40Q9DC48 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Cdc40Q9DC48 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cdc40Q9DC48 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Gm17376-201ENSMUST00000166016 84 ntBASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Morn2-202ENSMUST00000227729 656 ntBASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.58□□□□□ -0.56
Cdc40Q9DC48 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Gm24255-201ENSMUST00000104481 128 ntBASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Mir433-201ENSMUST00000093564 124 ntBASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms