Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Gm25214-201ENSMUST00000104573 129 ntBASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Gm25043-201ENSMUST00000158604 212 ntBASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Gm20482-202ENSMUST00000174729 825 ntBASIC12.77□□□□□ -0.37
Vps28Q9D1C8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Gm31256-201ENSMUST00000194705 506 ntBASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps28Q9D1C8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Gm15703-201ENSMUST00000120250 880 ntBASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Gm13315-201ENSMUST00000120376 991 ntBASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Gm14726-201ENSMUST00000120623 896 ntBASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Gm27243-201ENSMUST00000183964 521 ntBASIC12.76□□□□□ -0.37
Vps28Q9D1C8 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps28Q9D1C8 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Gm14999-201ENSMUST00000121039 624 ntBASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Gm11597-201ENSMUST00000121423 964 ntBASIC12.75□□□□□ -0.37
Vps28Q9D1C8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.75□□□□□ -0.37
Vps28Q9D1C8 Gm37259-201ENSMUST00000193903 849 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms