Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.85□□□□□ -0.51
Otud1Q9CUB6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Otud1Q9CUB6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Mir877-201ENSMUST00000104738 85 ntBASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Gm13570-201ENSMUST00000140763 309 ntBASIC11.84□□□□□ -0.51
Otud1Q9CUB6 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Gm27023-201ENSMUST00000182372 285 ntBASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Gm9022-201ENSMUST00000182482 992 ntBASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Otud1Q9CUB6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.84□□□□□ -0.51
Otud1Q9CUB6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Otud1Q9CUB6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Otud1Q9CUB6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Otud1Q9CUB6 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Gm15547-201ENSMUST00000122152 333 ntBASIC11.83□□□□□ -0.52
Otud1Q9CUB6 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Gm9723-201ENSMUST00000192100 457 ntBASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Gm42937-201ENSMUST00000197360 752 ntBASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 CT025642.1-201ENSMUST00000224734 1219 ntBASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otud1Q9CUB6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Otud1Q9CUB6 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.82□□□□□ -0.52
Otud1Q9CUB6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otud1Q9CUB6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otud1Q9CUB6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otud1Q9CUB6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otud1Q9CUB6 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otud1Q9CUB6 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Otud1Q9CUB6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otud1Q9CUB6 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otud1Q9CUB6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otud1Q9CUB6 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otud1Q9CUB6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otud1Q9CUB6 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms