Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Gm23363-201ENSMUST00000175024 79 ntBASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Gm18307-201ENSMUST00000206864 949 ntBASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Gm7730-201ENSMUST00000212486 454 ntBASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.21□□□□□ -0.61
Krt88Q9CPR6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Krt88Q9CPR6 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Krt88Q9CPR6 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Krt88Q9CPR6 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Krt88Q9CPR6 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Krt88Q9CPR6 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Krt88Q9CPR6 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Krt88Q9CPR6 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Krt88Q9CPR6 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Krt88Q9CPR6 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.21□□□□□ -0.62
Krt88Q9CPR6 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Krt88Q9CPR6 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Krt88Q9CPR6 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Krt88Q9CPR6 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Krt88Q9CPR6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Gm6152-201ENSMUST00000151704 340 ntBASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms