Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.43□□□□□ -0.42
Trim33Q99PP7 Gm3890-201ENSMUST00000182416 207 ntBASIC12.43□□□□□ -0.42
Trim33Q99PP7 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.43□□□□□ -0.42
Trim33Q99PP7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim33Q99PP7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Gm37008-201ENSMUST00000195712 319 ntBASIC12.43□□□□□ -0.42
Trim33Q99PP7 Gm18584-201ENSMUST00000203098 964 ntBASIC12.43□□□□□ -0.42
Trim33Q99PP7 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.43□□□□□ -0.42
Trim33Q99PP7 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.42□□□□□ -0.42
Trim33Q99PP7 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.42□□□□□ -0.42
Trim33Q99PP7 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim33Q99PP7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Gm5178-201ENSMUST00000219380 898 ntBASIC12.42□□□□□ -0.42
Trim33Q99PP7 AC155266.1-201ENSMUST00000220762 904 ntBASIC12.42□□□□□ -0.42
Trim33Q99PP7 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim33Q99PP7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.42□□□□□ -0.42
Trim33Q99PP7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.41□□□□□ -0.42
Trim33Q99PP7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.41□□□□□ -0.42
Trim33Q99PP7 Gm37436-201ENSMUST00000193842 1085 ntBASIC12.41□□□□□ -0.42
Trim33Q99PP7 Gm38092-201ENSMUST00000195600 653 ntBASIC12.41□□□□□ -0.42
Trim33Q99PP7 Gm19184-201ENSMUST00000196798 928 ntBASIC12.41□□□□□ -0.42
Trim33Q99PP7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.41□□□□□ -0.42
Trim33Q99PP7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms