Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.31□□□□□ -0.44
Cdh23Q99PF4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.31□□□□□ -0.44
Cdh23Q99PF4 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Gm13117-201ENSMUST00000120894 691 ntBASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Gm22379-201ENSMUST00000157480 131 ntBASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Gm26134-201ENSMUST00000178484 110 ntBASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh23Q99PF4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Gm24328-201ENSMUST00000175104 67 ntBASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Gm2448-201ENSMUST00000207080 559 ntBASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Gm5705-201ENSMUST00000066241 711 ntBASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Gm14993-201ENSMUST00000121180 164 ntBASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms