Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Gm7029-201ENSMUST00000173226 450 ntBASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Gm37424-201ENSMUST00000191727 561 ntBASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Gm44124-201ENSMUST00000204159 472 ntBASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Mir686-201ENSMUST00000102174 109 ntBASIC12.04□□□□□ -0.48
Vmp1Q99KU0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Gm8062-201ENSMUST00000139696 444 ntBASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Gm17420-201ENSMUST00000164753 153 ntBASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Gm27514-201ENSMUST00000183692 110 ntBASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Gm43636-201ENSMUST00000201501 2235 ntBASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Vmp1Q99KU0 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.03□□□□□ -0.48
Vmp1Q99KU0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms