Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.54□□□□□ -0.4
Cdk9Q99J95 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Gm15371-201ENSMUST00000117057 784 ntBASIC12.54□□□□□ -0.4
Cdk9Q99J95 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Gm37917-201ENSMUST00000194711 392 ntBASIC12.54□□□□□ -0.4
Cdk9Q99J95 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Gm6458-201ENSMUST00000211573 635 ntBASIC12.54□□□□□ -0.4
Cdk9Q99J95 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.54□□□□□ -0.4
Cdk9Q99J95 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Gm19220-201ENSMUST00000222682 803 ntBASIC12.54□□□□□ -0.4
Cdk9Q99J95 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Cdk9Q99J95 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk9Q99J95 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.53□□□□□ -0.4
Cdk9Q99J95 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.53□□□□□ -0.4
Cdk9Q99J95 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.53□□□□□ -0.4
Cdk9Q99J95 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.53□□□□□ -0.4
Cdk9Q99J95 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.53□□□□□ -0.4
Cdk9Q99J95 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Gm15823-201ENSMUST00000064305 670 ntBASIC12.53□□□□□ -0.4
Cdk9Q99J95 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdk9Q99J95 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk9Q99J95 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdk9Q99J95 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdk9Q99J95 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdk9Q99J95 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdk9Q99J95 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cdk9Q99J95 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdk9Q99J95 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdk9Q99J95 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdk9Q99J95 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms