Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha8Q91Y12 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Mir1982-201ENSMUST00000157368 74 ntBASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Snora78-201ENSMUST00000158630 128 ntBASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Gm25857-201ENSMUST00000082788 129 ntBASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha8Q91Y12 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Gm5904-201ENSMUST00000210286 865 ntBASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Gm5781-201ENSMUST00000219792 443 ntBASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha8Q91Y12 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms