Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha9Q91Y11 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Gm24934-201ENSMUST00000103764 111 ntBASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha9Q91Y11 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdha9Q91Y11 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdha9Q91Y11 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.21□□□□□ -0.3
Pcdha9Q91Y11 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Pcdha9Q91Y11 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdha9Q91Y11 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdha9Q91Y11 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.21□□□□□ -0.3
Pcdha9Q91Y11 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
Pcdha9Q91Y11 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Gm31256-201ENSMUST00000194705 506 ntBASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Gm43179-201ENSMUST00000198797 275 ntBASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha9Q91Y11 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms