Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 AC109214.2-201ENSMUST00000220089 358 ntBASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 AC154747.1-201ENSMUST00000225265 239 ntBASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 AC137950.3-201ENSMUST00000228250 246 ntBASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Gm24919-201ENSMUST00000083020 106 ntBASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Gm45719-201ENSMUST00000207954 1662 ntBASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb20Q91XZ9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Serpini2-201ENSMUST00000039047 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gm45263-201ENSMUST00000210377 1375 ntBASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gm8805-201ENSMUST00000117848 313 ntBASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gm1335-201ENSMUST00000121653 386 ntBASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gm37987-201ENSMUST00000194999 825 ntBASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 1700102F20Rik-201ENSMUST00000203859 670 ntBASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gm10146-201ENSMUST00000072739 309 ntBASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb20Q91XZ9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms