Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
StrcQ8VIM6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
StrcQ8VIM6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
StrcQ8VIM6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
StrcQ8VIM6 Gm15610-201ENSMUST00000120584 195 ntBASIC14.4□□□□□ -0.1
StrcQ8VIM6 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC14.4□□□□□ -0.1
StrcQ8VIM6 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
StrcQ8VIM6 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC14.4□□□□□ -0.1
StrcQ8VIM6 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC14.4□□□□□ -0.1
StrcQ8VIM6 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
StrcQ8VIM6 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
StrcQ8VIM6 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
StrcQ8VIM6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
StrcQ8VIM6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
StrcQ8VIM6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
StrcQ8VIM6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
StrcQ8VIM6 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
StrcQ8VIM6 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC14.4□□□□□ -0.1
StrcQ8VIM6 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.4□□□□□ -0.1
StrcQ8VIM6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
StrcQ8VIM6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
StrcQ8VIM6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.11
StrcQ8VIM6 Gm13347-201ENSMUST00000120298 1353 ntBASIC14.39□□□□□ -0.11
StrcQ8VIM6 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Gm11560-201ENSMUST00000117567 948 ntBASIC14.39□□□□□ -0.11
StrcQ8VIM6 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Gm12906-201ENSMUST00000154610 441 ntBASIC14.39□□□□□ -0.11
StrcQ8VIM6 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Gm43671-201ENSMUST00000200422 433 ntBASIC14.39□□□□□ -0.11
StrcQ8VIM6 Gm42655-201ENSMUST00000202782 1134 ntBASIC14.39□□□□□ -0.11
StrcQ8VIM6 Gm45085-201ENSMUST00000209100 441 ntBASIC14.39□□□□□ -0.11
StrcQ8VIM6 Olfr692-202ENSMUST00000217827 1126 ntBASIC14.39□□□□□ -0.11
StrcQ8VIM6 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.39□□□□□ -0.11
StrcQ8VIM6 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.39□□□□□ -0.11
StrcQ8VIM6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
StrcQ8VIM6 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
StrcQ8VIM6 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC14.38□□□□□ -0.11
StrcQ8VIM6 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC14.38□□□□□ -0.11
StrcQ8VIM6 AC153152.3-201ENSMUST00000222188 1135 ntBASIC14.38□□□□□ -0.11
StrcQ8VIM6 CT573047.1-201ENSMUST00000223652 851 ntBASIC14.38□□□□□ -0.11
StrcQ8VIM6 CT030135.2-201ENSMUST00000225255 893 ntBASIC14.38□□□□□ -0.11
StrcQ8VIM6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.38□□□□□ -0.11
StrcQ8VIM6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.38□□□□□ -0.11
StrcQ8VIM6 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.38□□□□□ -0.11
StrcQ8VIM6 Gm9166-201ENSMUST00000120293 561 ntBASIC14.38□□□□□ -0.11
StrcQ8VIM6 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Gm13445-201ENSMUST00000121664 307 ntBASIC14.38□□□□□ -0.11
StrcQ8VIM6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC14.38□□□□□ -0.11
StrcQ8VIM6 Gm26368-201ENSMUST00000157826 118 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms