Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Rpa1Q8VEE4 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rpa1Q8VEE4 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Rpa1Q8VEE4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Rpa1Q8VEE4 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rpa1Q8VEE4 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rpa1Q8VEE4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Gm15487-201ENSMUST00000122373 465 ntBASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Gm44069-201ENSMUST00000204898 506 ntBASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Mir339-201ENSMUST00000083659 96 ntBASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.58□□□□□ -0.4
Rpa1Q8VEE4 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Gm14719-201ENSMUST00000121891 340 ntBASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms