Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Gm13315-201ENSMUST00000120376 991 ntBASIC11.74□□□□□ -0.53
Clrn1Q8K445 Gm14760-201ENSMUST00000121831 999 ntBASIC11.74□□□□□ -0.53
Clrn1Q8K445 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Clrn1Q8K445 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Gm6007-201ENSMUST00000208170 823 ntBASIC11.74□□□□□ -0.53
Clrn1Q8K445 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Gm19309-201ENSMUST00000218295 205 ntBASIC11.74□□□□□ -0.53
Clrn1Q8K445 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.74□□□□□ -0.53
Clrn1Q8K445 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.74□□□□□ -0.53
Clrn1Q8K445 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Clrn1Q8K445 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.73□□□□□ -0.53
Clrn1Q8K445 Gm10434-201ENSMUST00000101158 471 ntBASIC11.73□□□□□ -0.53
Clrn1Q8K445 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.73□□□□□ -0.53
Clrn1Q8K445 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Gm9630-201ENSMUST00000178304 885 ntBASIC11.73□□□□□ -0.53
Clrn1Q8K445 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Gm9022-201ENSMUST00000182482 992 ntBASIC11.73□□□□□ -0.53
Clrn1Q8K445 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Gm42627-201ENSMUST00000197347 224 ntBASIC11.73□□□□□ -0.53
Clrn1Q8K445 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.73□□□□□ -0.53
Clrn1Q8K445 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.73□□□□□ -0.53
Clrn1Q8K445 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.73□□□□□ -0.53
Clrn1Q8K445 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Gm10478-201ENSMUST00000084451 396 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms