Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.74□□□□□ -0.37
CopaQ8CIE6 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.74□□□□□ -0.37
CopaQ8CIE6 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Gm8738-201ENSMUST00000172606 329 ntBASIC12.73□□□□□ -0.37
CopaQ8CIE6 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.73□□□□□ -0.37
CopaQ8CIE6 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.73□□□□□ -0.37
CopaQ8CIE6 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.73□□□□□ -0.37
CopaQ8CIE6 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.73□□□□□ -0.37
CopaQ8CIE6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopaQ8CIE6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.72□□□□□ -0.37
CopaQ8CIE6 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Gm22121-201ENSMUST00000175148 54 ntBASIC12.72□□□□□ -0.37
CopaQ8CIE6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.72□□□□□ -0.37
CopaQ8CIE6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.72□□□□□ -0.37
CopaQ8CIE6 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms