Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.55□□□□□ -0.4
Clip4Q8CI96 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.55□□□□□ -0.4
Clip4Q8CI96 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Gm38002-201ENSMUST00000193255 180 ntBASIC12.55□□□□□ -0.4
Clip4Q8CI96 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.55□□□□□ -0.4
Clip4Q8CI96 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Clip4Q8CI96 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clip4Q8CI96 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Gm11591-201ENSMUST00000120063 702 ntBASIC12.54□□□□□ -0.4
Clip4Q8CI96 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Gm6222-202ENSMUST00000182143 629 ntBASIC12.54□□□□□ -0.4
Clip4Q8CI96 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.54□□□□□ -0.4
Clip4Q8CI96 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.54□□□□□ -0.4
Clip4Q8CI96 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.54□□□□□ -0.4
Clip4Q8CI96 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.54□□□□□ -0.4
Clip4Q8CI96 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Daam2-202ENSMUST00000224595 1926 ntBASIC12.54□□□□□ -0.4
Clip4Q8CI96 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.54□□□□□ -0.4
Clip4Q8CI96 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clip4Q8CI96 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.53□□□□□ -0.4
Clip4Q8CI96 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clip4Q8CI96 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clip4Q8CI96 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clip4Q8CI96 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clip4Q8CI96 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Clip4Q8CI96 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clip4Q8CI96 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clip4Q8CI96 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Clip4Q8CI96 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.53□□□□□ -0.4
Clip4Q8CI96 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Clip4Q8CI96 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.53□□□□□ -0.4
Clip4Q8CI96 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.53□□□□□ -0.4
Clip4Q8CI96 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.53□□□□□ -0.4
Clip4Q8CI96 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clip4Q8CI96 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.53□□□□□ -0.4
Clip4Q8CI96 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clip4Q8CI96 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.53□□□□□ -0.4
Clip4Q8CI96 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.53□□□□□ -0.4
Clip4Q8CI96 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.53□□□□□ -0.4
Clip4Q8CI96 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.53□□□□□ -0.4
Clip4Q8CI96 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Clip4Q8CI96 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clip4Q8CI96 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clip4Q8CI96 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms