Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
ShfQ8CG80 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ShfQ8CG80 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ShfQ8CG80 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.09□□□□□ -0.63
ShfQ8CG80 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
ShfQ8CG80 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ShfQ8CG80 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.09□□□□□ -0.63
ShfQ8CG80 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.09□□□□□ -0.63
ShfQ8CG80 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.09□□□□□ -0.63
ShfQ8CG80 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
ShfQ8CG80 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ShfQ8CG80 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.09□□□□□ -0.63
ShfQ8CG80 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.09□□□□□ -0.63
ShfQ8CG80 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.09□□□□□ -0.63
ShfQ8CG80 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.09□□□□□ -0.63
ShfQ8CG80 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.09□□□□□ -0.63
ShfQ8CG80 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ShfQ8CG80 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.09□□□□□ -0.63
ShfQ8CG80 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.09□□□□□ -0.63
ShfQ8CG80 Gm18304-201ENSMUST00000189162 546 ntBASIC11.09□□□□□ -0.63
ShfQ8CG80 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.09□□□□□ -0.63
ShfQ8CG80 Gm6007-201ENSMUST00000208170 823 ntBASIC11.09□□□□□ -0.63
ShfQ8CG80 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.09□□□□□ -0.63
ShfQ8CG80 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ShfQ8CG80 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.09□□□□□ -0.63
ShfQ8CG80 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.09□□□□□ -0.63
ShfQ8CG80 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.09□□□□□ -0.63
ShfQ8CG80 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ShfQ8CG80 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
ShfQ8CG80 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ShfQ8CG80 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ShfQ8CG80 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ShfQ8CG80 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ShfQ8CG80 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ShfQ8CG80 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ShfQ8CG80 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
ShfQ8CG80 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
ShfQ8CG80 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.08□□□□□ -0.64
ShfQ8CG80 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.08□□□□□ -0.64
ShfQ8CG80 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.08□□□□□ -0.64
ShfQ8CG80 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Gm13315-201ENSMUST00000120376 991 ntBASIC11.08□□□□□ -0.64
ShfQ8CG80 Gm15806-201ENSMUST00000120696 955 ntBASIC11.08□□□□□ -0.64
ShfQ8CG80 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.08□□□□□ -0.64
ShfQ8CG80 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.08□□□□□ -0.64
ShfQ8CG80 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.08□□□□□ -0.64
ShfQ8CG80 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.08□□□□□ -0.64
ShfQ8CG80 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
ShfQ8CG80 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.08□□□□□ -0.64
ShfQ8CG80 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.08□□□□□ -0.64
ShfQ8CG80 Gm45930-201ENSMUST00000221330 292 ntBASIC11.08□□□□□ -0.64
ShfQ8CG80 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
ShfQ8CG80 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.08□□□□□ -0.64
ShfQ8CG80 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.08□□□□□ -0.64
ShfQ8CG80 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.08□□□□□ -0.64
ShfQ8CG80 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.08□□□□□ -0.64
ShfQ8CG80 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ShfQ8CG80 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
ShfQ8CG80 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
ShfQ8CG80 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Gm12314-201ENSMUST00000118104 538 ntBASIC11.07□□□□□ -0.64
ShfQ8CG80 Gm9083-201ENSMUST00000120423 819 ntBASIC11.07□□□□□ -0.64
ShfQ8CG80 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.07□□□□□ -0.64
ShfQ8CG80 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.07□□□□□ -0.64
ShfQ8CG80 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.07□□□□□ -0.64
ShfQ8CG80 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms