Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Gm19220-201ENSMUST00000222682 803 ntBASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc28bQ8CEG5 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Gm42612-201ENSMUST00000197986 623 ntBASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Gm43170-201ENSMUST00000199827 612 ntBASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc28bQ8CEG5 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms