Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Gm14999-201ENSMUST00000121039 624 ntBASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Mir7085-201ENSMUST00000184353 66 ntBASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Gm44958-201ENSMUST00000203734 736 ntBASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Gm8227-201ENSMUST00000223306 571 ntBASIC12.82□□□□□ -0.36
Trub1Q8C0D0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trub1Q8C0D0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Gm37201-201ENSMUST00000191845 523 ntBASIC12.81□□□□□ -0.36
Trub1Q8C0D0 AY702102-202ENSMUST00000194651 1173 ntBASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Gm45880-201ENSMUST00000213041 853 ntBASIC12.81□□□□□ -0.36
Trub1Q8C0D0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trub1Q8C0D0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Gm10434-201ENSMUST00000101158 471 ntBASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Gm12957-201ENSMUST00000117835 377 ntBASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Gm8062-201ENSMUST00000139696 444 ntBASIC12.8□□□□□ -0.36
Trub1Q8C0D0 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Gm27023-201ENSMUST00000182372 285 ntBASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Gm42937-201ENSMUST00000197360 752 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms