Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smg1Q8BKX6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Gm11619-201ENSMUST00000117474 237 ntBASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Gm26875-201ENSMUST00000181006 950 ntBASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Gm43997-201ENSMUST00000203986 1005 ntBASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Gm6564-201ENSMUST00000075377 619 ntBASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 AC159810.1-201ENSMUST00000214838 1480 ntBASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Gm14234-201ENSMUST00000119539 845 ntBASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Gm8815-201ENSMUST00000173809 620 ntBASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Gm24328-201ENSMUST00000175104 67 ntBASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Gm17944-201ENSMUST00000186351 643 ntBASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Gm5700-201ENSMUST00000191483 989 ntBASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smg1Q8BKX6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC10.22□□□□□ -0.77
Smg1Q8BKX6 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.22□□□□□ -0.77
Smg1Q8BKX6 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smg1Q8BKX6 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.22□□□□□ -0.77
Smg1Q8BKX6 Gm24078-201ENSMUST00000158184 103 ntBASIC10.22□□□□□ -0.77
Smg1Q8BKX6 Gm43506-201ENSMUST00000200675 753 ntBASIC10.22□□□□□ -0.77
Smg1Q8BKX6 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smg1Q8BKX6 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.22□□□□□ -0.77
Smg1Q8BKX6 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smg1Q8BKX6 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Smg1Q8BKX6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.22□□□□□ -0.77
Smg1Q8BKX6 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smg1Q8BKX6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.22□□□□□ -0.77
Smg1Q8BKX6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms