Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc40Q8BI79 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Gm11424-201ENSMUST00000121929 829 ntBASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc40Q8BI79 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Gm26927-201ENSMUST00000182385 965 ntBASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Gm19163-201ENSMUST00000223313 780 ntBASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 AC166359.1-201ENSMUST00000220243 1871 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms