Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Usp8Q80U87 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Usp8Q80U87 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.52□□□□□ -0.41
Usp8Q80U87 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Usp8Q80U87 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.52□□□□□ -0.41
Usp8Q80U87 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Usp8Q80U87 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.51□□□□□ -0.41
Usp8Q80U87 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp8Q80U87 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp8Q80U87 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.51□□□□□ -0.41
Usp8Q80U87 Gm12490-201ENSMUST00000120255 560 ntBASIC12.51□□□□□ -0.41
Usp8Q80U87 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp8Q80U87 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.51□□□□□ -0.41
Usp8Q80U87 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp8Q80U87 Gm22121-201ENSMUST00000175148 54 ntBASIC12.51□□□□□ -0.41
Usp8Q80U87 Gm8652-201ENSMUST00000181363 964 ntBASIC12.51□□□□□ -0.41
Usp8Q80U87 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.51□□□□□ -0.41
Usp8Q80U87 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.51□□□□□ -0.41
Usp8Q80U87 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp8Q80U87 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Usp8Q80U87 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.51□□□□□ -0.41
Usp8Q80U87 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.51□□□□□ -0.41
Usp8Q80U87 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp8Q80U87 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.51□□□□□ -0.41
Usp8Q80U87 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp8Q80U87 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.51□□□□□ -0.41
Usp8Q80U87 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp8Q80U87 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp8Q80U87 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.5□□□□□ -0.41
Usp8Q80U87 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.5□□□□□ -0.41
Usp8Q80U87 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.5□□□□□ -0.41
Usp8Q80U87 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Usp8Q80U87 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Usp8Q80U87 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.5□□□□□ -0.41
Usp8Q80U87 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.5□□□□□ -0.41
Usp8Q80U87 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.5□□□□□ -0.41
Usp8Q80U87 Gm23363-201ENSMUST00000175024 79 ntBASIC12.5□□□□□ -0.41
Usp8Q80U87 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.5□□□□□ -0.41
Usp8Q80U87 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Usp8Q80U87 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Usp8Q80U87 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Usp8Q80U87 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Usp8Q80U87 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.5□□□□□ -0.41
Usp8Q80U87 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms