Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Gm16296-201ENSMUST00000159905 325 ntBASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Gm14999-201ENSMUST00000121039 624 ntBASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Mir5132-201ENSMUST00000175166 71 ntBASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 AA914427-201ENSMUST00000193194 1166 ntBASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh8Q7TSK3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Gm13665-201ENSMUST00000120830 528 ntBASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Gm14277-201ENSMUST00000121195 360 ntBASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Gm26361-201ENSMUST00000158868 186 ntBASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Gm8712-201ENSMUST00000221090 701 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms