Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Gm9996-201ENSMUST00000070359 913 ntBASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ubfd1Q78JW9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ubfd1Q78JW9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Ubfd1Q78JW9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ubfd1Q78JW9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Gm24934-201ENSMUST00000103764 111 ntBASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Gm11439-201ENSMUST00000118598 409 ntBASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Gm9083-201ENSMUST00000120423 819 ntBASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Gm44262-201ENSMUST00000204969 372 ntBASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Ubfd1Q78JW9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Gm14277-201ENSMUST00000121195 360 ntBASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Gm16505-201ENSMUST00000179981 232 ntBASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubfd1Q78JW9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms