Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ParpbpQ6IRT3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Paupar-201ENSMUST00000194826 3482 ntBASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Gm25261-201ENSMUST00000157416 134 ntBASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Gm16379-201ENSMUST00000161469 348 ntBASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Gm3890-201ENSMUST00000182416 207 ntBASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Gm27514-201ENSMUST00000183692 110 ntBASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Gm8762-201ENSMUST00000193486 339 ntBASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Gm45880-201ENSMUST00000213041 853 ntBASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
ParpbpQ6IRT3 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ParpbpQ6IRT3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Gm6023-201ENSMUST00000118217 606 ntBASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Gm13492-201ENSMUST00000119772 665 ntBASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Gm24526-201ENSMUST00000082921 158 ntBASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Gm22058-201ENSMUST00000083393 310 ntBASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ParpbpQ6IRT3 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms