Protein–RNA interactions for Protein: Q6DFW4

Nop58, Nucleolar protein 58, mousemouse

Known RBP Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop58Q6DFW4 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop58Q6DFW4 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop58Q6DFW4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC17.1■□□□□ 0.33
Nop58Q6DFW4 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Gm13223-201ENSMUST00000118609 747 ntBASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Gm14822-201ENSMUST00000122247 291 ntBASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nop58Q6DFW4 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nop58Q6DFW4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Nop58Q6DFW4 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC17.08■□□□□ 0.33
Nop58Q6DFW4 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nop58Q6DFW4 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nop58Q6DFW4 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nop58Q6DFW4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nop58Q6DFW4 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nop58Q6DFW4 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nop58Q6DFW4 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nop58Q6DFW4 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC17.08■□□□□ 0.33
Nop58Q6DFW4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nop58Q6DFW4 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms