Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Rmrp-201ENSMUST00000157463 271 ntBASIC13.21□□□□□ -0.29
Scube3Q66PY1 Gm16570-201ENSMUST00000161951 436 ntBASIC13.21□□□□□ -0.29
Scube3Q66PY1 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.21□□□□□ -0.29
Scube3Q66PY1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.21□□□□□ -0.29
Scube3Q66PY1 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.21□□□□□ -0.29
Scube3Q66PY1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.21□□□□□ -0.29
Scube3Q66PY1 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC13.21□□□□□ -0.29
Scube3Q66PY1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.21□□□□□ -0.29
Scube3Q66PY1 CT010480.1-201ENSMUST00000223612 363 ntBASIC13.21□□□□□ -0.29
Scube3Q66PY1 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.21□□□□□ -0.29
Scube3Q66PY1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.21□□□□□ -0.29
Scube3Q66PY1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Scube3Q66PY1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scube3Q66PY1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Scube3Q66PY1 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scube3Q66PY1 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Scube3Q66PY1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Scube3Q66PY1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Gm13255-201ENSMUST00000117255 547 ntBASIC13.2□□□□□ -0.3
Scube3Q66PY1 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.2□□□□□ -0.3
Scube3Q66PY1 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Gm43822-201ENSMUST00000200285 476 ntBASIC13.2□□□□□ -0.3
Scube3Q66PY1 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.2□□□□□ -0.3
Scube3Q66PY1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.2□□□□□ -0.3
Scube3Q66PY1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scube3Q66PY1 Gm44975-201ENSMUST00000207435 1390 ntBASIC13.2□□□□□ -0.3
Scube3Q66PY1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Scube3Q66PY1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Scube3Q66PY1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.19□□□□□ -0.3
Scube3Q66PY1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Gm24231-201ENSMUST00000104315 133 ntBASIC13.19□□□□□ -0.3
Scube3Q66PY1 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Gm15236-201ENSMUST00000117309 379 ntBASIC13.19□□□□□ -0.3
Scube3Q66PY1 Gm4732-201ENSMUST00000118778 473 ntBASIC13.19□□□□□ -0.3
Scube3Q66PY1 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.19□□□□□ -0.3
Scube3Q66PY1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scube3Q66PY1 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scube3Q66PY1 Gm43758-201ENSMUST00000199500 367 ntBASIC13.19□□□□□ -0.3
Scube3Q66PY1 Gm3961-201ENSMUST00000204425 994 ntBASIC13.19□□□□□ -0.3
Scube3Q66PY1 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.19□□□□□ -0.3
Scube3Q66PY1 CT025525.1-201ENSMUST00000226325 1054 ntBASIC13.19□□□□□ -0.3
Scube3Q66PY1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms