Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm14371-201ENSMUST00000138925 1518 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Tmed9-203ENSMUST00000224741 1450 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm16202-201ENSMUST00000117532 544 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm10156-201ENSMUST00000122364 462 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm24644-201ENSMUST00000157114 139 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm24111-201ENSMUST00000175491 97 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm5370-201ENSMUST00000187187 574 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm37809-201ENSMUST00000195050 931 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm42591-201ENSMUST00000197249 700 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm42782-201ENSMUST00000197286 522 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm45258-201ENSMUST00000210042 853 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 AC140451.2-201ENSMUST00000228030 664 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 AC122459.1-201ENSMUST00000228373 885 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm10012-201ENSMUST00000078252 192 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC9.43□□□□□ -0.9
Foxc1Q61572 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Foxc1Q61572 Gm4782-201ENSMUST00000168705 2046 ntBASIC9.43□□□□□ -0.9
Foxc1Q61572 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Foxc1Q61572 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Gm7899-201ENSMUST00000192935 1897 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC9.42□□□□□ -0.9
Foxc1Q61572 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Foxc1Q61572 BC043934-202ENSMUST00000185694 2356 ntBASIC9.42□□□□□ -0.9
Foxc1Q61572 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms